Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc5a7Q8BGY9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gm12260-201ENSMUST00000122447 411 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Shd-206ENSMUST00000225145 998 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc5a7Q8BGY9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gm12585-201ENSMUST00000117307 290 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gm18905-201ENSMUST00000205454 928 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc5a7Q8BGY9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc5a7Q8BGY9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms