Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ttc28Q80XJ3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm12165-201ENSMUST00000117047 342 ntBASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm14460-201ENSMUST00000121511 639 ntBASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm23218-201ENSMUST00000158124 276 ntBASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm10179-201ENSMUST00000086233 688 ntBASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ttc28Q80XJ3 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm38210-201ENSMUST00000191944 809 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm42779-201ENSMUST00000198807 406 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm4607-201ENSMUST00000206649 577 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm19187-201ENSMUST00000206781 892 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm45925-201ENSMUST00000218882 744 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm32999-201ENSMUST00000192693 562 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gzmn-202ENSMUST00000225535 989 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ttc28Q80XJ3 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms