Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.4□□□□□ -0.27
Trim62Q80V85 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm13813-201ENSMUST00000120998 787 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim62Q80V85 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Snora73a-201ENSMUST00000082453 205 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.39□□□□□ -0.27
Trim62Q80V85 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim62Q80V85 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim62Q80V85 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.38□□□□□ -0.27
Trim62Q80V85 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim62Q80V85 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm18584-201ENSMUST00000203098 964 ntBASIC13.38□□□□□ -0.27
Trim62Q80V85 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim62Q80V85 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim62Q80V85 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim62Q80V85 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.38□□□□□ -0.27
Trim62Q80V85 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Gm13492-201ENSMUST00000119772 665 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 Mir7085-201ENSMUST00000184353 66 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Mir339-201ENSMUST00000083659 96 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.37□□□□□ -0.27
Trim62Q80V85 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms