Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Gm37691-201ENSMUST00000192147 2573 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gm38355-201ENSMUST00000192514 1570 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gm44891-201ENSMUST00000208817 2223 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gm13328-201ENSMUST00000120816 1020 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gm43610-201ENSMUST00000199117 365 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 AC153505.1-201ENSMUST00000218819 1071 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Mir339-201ENSMUST00000083659 96 ntBASIC8.61□□□□□ -1.03
Csmd3Q80T79 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Csmd3Q80T79 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Mir6998-201ENSMUST00000183343 64 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm45120-201ENSMUST00000208880 408 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm43364-201ENSMUST00000196046 3274 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm4654-201ENSMUST00000183305 982 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm42518-201ENSMUST00000196277 938 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm43778-201ENSMUST00000199438 199 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 CT030637.1-201ENSMUST00000228016 669 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm15459-201ENSMUST00000117405 1941 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm8355-201ENSMUST00000177767 1941 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm13668-201ENSMUST00000119237 1001 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm9139-201ENSMUST00000218817 700 ntBASIC8.6□□□□□ -1.03
Csmd3Q80T79 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Csmd3Q80T79 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm12990-201ENSMUST00000120372 468 ntBASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm9230-201ENSMUST00000188228 532 ntBASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Csmd3Q80T79 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms