Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ctdp1Q7TSG2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctdp1Q7TSG2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Gm28760-201ENSMUST00000185995 736 ntBASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdp1Q7TSG2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms