Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp3Q7TNH6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm27501-201ENSMUST00000183599 107 ntBASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm8099-201ENSMUST00000200510 742 ntBASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm18584-201ENSMUST00000203098 964 ntBASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Olfr284-202ENSMUST00000206647 966 ntBASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp3Q7TNH6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gm5781-201ENSMUST00000219792 443 ntBASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nphp3Q7TNH6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp3Q7TNH6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms