Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gm7783-201ENSMUST00000204795 781 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ubfd1Q78JW9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm45865-201ENSMUST00000211815 945 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubfd1Q78JW9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ubfd1Q78JW9 Gm38341-201ENSMUST00000195357 515 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms