Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm3508-201ENSMUST00000186012 792 ntBASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Gm19187-201ENSMUST00000206781 892 ntBASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx55Q6ZPL9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx55Q6ZPL9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Mir874-201ENSMUST00000104769 76 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Gm9555-201ENSMUST00000200908 583 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Gm45770-201ENSMUST00000212105 616 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx55Q6ZPL9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Ddx55Q6ZPL9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ddx55Q6ZPL9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm9062-201ENSMUST00000117712 727 ntBASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm12380-201ENSMUST00000119012 544 ntBASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm13315-201ENSMUST00000120376 991 ntBASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx55Q6ZPL9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms