Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm22146-201ENSMUST00000157397 288 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm3332-201ENSMUST00000189337 928 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Mir744-201ENSMUST00000103261 100 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm13875-201ENSMUST00000120162 282 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm27627-201ENSMUST00000183644 150 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm38092-201ENSMUST00000195600 653 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm18038-201ENSMUST00000197900 485 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm6855-201ENSMUST00000206307 790 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.92□□□□□ -0.66
Rif1Q6PR54 Gm4604-201ENSMUST00000025040 390 ntBASIC10.92□□□□□ -0.66
Rif1Q6PR54 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Gm12403-201ENSMUST00000121384 959 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Mir1956-201ENSMUST00000157748 65 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.91□□□□□ -0.66
Rif1Q6PR54 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rif1Q6PR54 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms