Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm15782-201ENSMUST00000121073 445 ntBASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gzmn-202ENSMUST00000225535 989 ntBASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Snrnp40Q6PE01 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm13611-201ENSMUST00000118269 318 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm3508-201ENSMUST00000186012 792 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Rprl1-202ENSMUST00000198476 238 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Snrnp40Q6PE01 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Snrnp40Q6PE01 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms