Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf220Q6PDX6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22065-201ENSMUST00000103753 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22066-201ENSMUST00000103761 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24932-201ENSMUST00000103763 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24115-201ENSMUST00000103799 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22190-201ENSMUST00000103827 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22191-201ENSMUST00000103831 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24721-201ENSMUST00000103849 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm28018-201ENSMUST00000103869 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm26399-201ENSMUST00000103937 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm4995-201ENSMUST00000117247 432 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25349-201ENSMUST00000177728 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm23616-201ENSMUST00000177797 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25871-201ENSMUST00000177816 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24752-201ENSMUST00000178240 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24496-201ENSMUST00000178287 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25649-201ENSMUST00000178476 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25548-201ENSMUST00000178681 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm23147-201ENSMUST00000178841 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm26095-201ENSMUST00000179270 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22171-201ENSMUST00000179283 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm23936-201ENSMUST00000179354 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm22619-201ENSMUST00000179516 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25255-201ENSMUST00000179579 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24755-201ENSMUST00000179691 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm26506-201ENSMUST00000179692 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm25086-201ENSMUST00000179931 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm23243-201ENSMUST00000180047 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24659-201ENSMUST00000180212 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm24169-201ENSMUST00000180244 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm23689-201ENSMUST00000180354 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm27359-201ENSMUST00000184153 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm27785-201ENSMUST00000184268 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm27466-201ENSMUST00000184396 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm27703-201ENSMUST00000184836 110 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm29541-201ENSMUST00000191351 678 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gm37714-201ENSMUST00000194742 342 ntBASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf220Q6PDX6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf220Q6PDX6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms