Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Gm24934-201ENSMUST00000103764 111 ntBASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Gm12266-201ENSMUST00000120311 962 ntBASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Chd4Q6PDQ2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Gm15515-201ENSMUST00000117827 822 ntBASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Gm44551-201ENSMUST00000208804 171 ntBASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd4Q6PDQ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.57■□□□□ 0.24
Chd4Q6PDQ2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gm14644-201ENSMUST00000116671 647 ntBASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Spcs1-203ENSMUST00000226374 592 ntBASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms