Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm16202-201ENSMUST00000117532 544 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Mir1982-201ENSMUST00000157368 74 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Mir7085-201ENSMUST00000184353 66 ntBASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.11■□□□□ 0.01
Smarcc2Q6PDG5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gm12203-201ENSMUST00000118235 598 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gm12209-201ENSMUST00000120089 596 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gm29127-201ENSMUST00000188304 517 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smarcc2Q6PDG5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcc2Q6PDG5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms