Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm20949-201ENSMUST00000206478 952 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smarcd3Q6P9Z1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Smarcd3Q6P9Z1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.87□□□□□ -0.51
Smarcd3Q6P9Z1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms