Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.3■□□□□ 0.04
Col11a2Q64739 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.3■□□□□ 0.04
Col11a2Q64739 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm3793-201ENSMUST00000204973 672 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm45120-201ENSMUST00000208880 408 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm24231-201ENSMUST00000104315 133 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm23218-201ENSMUST00000158124 276 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 Gm28686-201ENSMUST00000187404 609 ntBASIC15.29■□□□□ 0.04
Col11a2Q64739 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.29■□□□□ 0.04
Col11a2Q64739 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.28■□□□□ 0.04
Col11a2Q64739 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.28■□□□□ 0.04
Col11a2Q64739 Gm43186-201ENSMUST00000198130 824 ntBASIC15.28■□□□□ 0.04
Col11a2Q64739 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Col11a2Q64739 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col11a2Q64739 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col11a2Q64739 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.27■□□□□ 0.04
Col11a2Q64739 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms