Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.76□□□□□ -0.37
VclQ64727 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
VclQ64727 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VclQ64727 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VclQ64727 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
VclQ64727 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
VclQ64727 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.75□□□□□ -0.37
VclQ64727 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.75□□□□□ -0.37
VclQ64727 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
VclQ64727 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VclQ64727 Gm5370-201ENSMUST00000187187 574 ntBASIC12.75□□□□□ -0.37
VclQ64727 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.75□□□□□ -0.37
VclQ64727 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.75□□□□□ -0.37
VclQ64727 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.75□□□□□ -0.37
VclQ64727 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VclQ64727 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.74□□□□□ -0.37
VclQ64727 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
VclQ64727 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.74□□□□□ -0.37
VclQ64727 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.74□□□□□ -0.37
VclQ64727 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.74□□□□□ -0.37
VclQ64727 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 Gm16479-201ENSMUST00000121706 932 ntBASIC12.74□□□□□ -0.37
VclQ64727 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.74□□□□□ -0.37
VclQ64727 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.74□□□□□ -0.37
VclQ64727 Mir7085-201ENSMUST00000184353 66 ntBASIC12.74□□□□□ -0.37
VclQ64727 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.74□□□□□ -0.37
VclQ64727 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.74□□□□□ -0.37
VclQ64727 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
VclQ64727 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
VclQ64727 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
VclQ64727 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms