Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sdc3Q64519 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sdc3Q64519 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Mir686-201ENSMUST00000102174 109 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Gm27682-201ENSMUST00000183930 110 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.48□□□□□ -0.41
Sdc3Q64519 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sdc3Q64519 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sdc3Q64519 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Mir1938-201ENSMUST00000158746 100 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Gm37497-201ENSMUST00000195830 798 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Sdc3Q64519 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms