Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VcanQ62059 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
VcanQ62059 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
VcanQ62059 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Trav11n-201ENSMUST00000200113 343 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Gm35960-201ENSMUST00000202712 767 ntBASIC11.82□□□□□ -0.52
VcanQ62059 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.82□□□□□ -0.52
VcanQ62059 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Gm4604-201ENSMUST00000025040 390 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
VcanQ62059 Rprl1-201ENSMUST00000158050 327 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Gm15744-201ENSMUST00000161734 213 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Gm42433-201ENSMUST00000196806 940 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.82□□□□□ -0.52
VcanQ62059 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.82□□□□□ -0.52
VcanQ62059 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VcanQ62059 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.81□□□□□ -0.52
VcanQ62059 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VcanQ62059 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VcanQ62059 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VcanQ62059 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
VcanQ62059 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VcanQ62059 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Gm23255-201ENSMUST00000102244 110 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Gm26013-201ENSMUST00000104404 119 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
VcanQ62059 Gm4654-201ENSMUST00000183305 982 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.81□□□□□ -0.52
VcanQ62059 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Gm270-201ENSMUST00000223010 976 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VcanQ62059 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.81□□□□□ -0.52
VcanQ62059 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms