Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Gm3436-201ENSMUST00000179930 840 ntBASIC12.13□□□□□ -0.47
Sox17Q61473 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Gm44344-201ENSMUST00000200287 129 ntBASIC12.13□□□□□ -0.47
Sox17Q61473 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox17Q61473 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.13□□□□□ -0.47
Sox17Q61473 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.13□□□□□ -0.47
Sox17Q61473 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox17Q61473 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Sox17Q61473 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.12□□□□□ -0.47
Sox17Q61473 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Sox17Q61473 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.12□□□□□ -0.47
Sox17Q61473 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.12□□□□□ -0.47
Sox17Q61473 Gm17795-201ENSMUST00000214505 757 ntBASIC12.12□□□□□ -0.47
Sox17Q61473 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Gm24447-201ENSMUST00000083977 338 ntBASIC12.12□□□□□ -0.47
Sox17Q61473 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox17Q61473 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox17Q61473 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox17Q61473 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.11□□□□□ -0.47
Sox17Q61473 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox17Q61473 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox17Q61473 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox17Q61473 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.11□□□□□ -0.47
Sox17Q61473 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox17Q61473 Gm5161-201ENSMUST00000075243 853 ntBASIC12.11□□□□□ -0.47
Sox17Q61473 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Sox17Q61473 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms