Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.47□□□□□ -0.25
Smarcd1Q61466 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm12502-201ENSMUST00000120197 444 ntBASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm8738-201ENSMUST00000172606 329 ntBASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.47□□□□□ -0.25
Smarcd1Q61466 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcd1Q61466 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Mir1247-201ENSMUST00000116706 82 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm6007-201ENSMUST00000208170 823 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd1Q61466 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Smarcd1Q61466 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.46□□□□□ -0.26
Smarcd1Q61466 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd1Q61466 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.45□□□□□ -0.26
Smarcd1Q61466 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd1Q61466 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms