Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ripk1Q60855 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm11918-201ENSMUST00000121660 179 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm6745-201ENSMUST00000199216 526 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm45384-201ENSMUST00000210451 277 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm9908-201ENSMUST00000211534 448 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.22□□□□□ -0.45
Ripk1Q60855 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ripk1Q60855 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.21□□□□□ -0.45
Ripk1Q60855 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm13612-201ENSMUST00000119276 390 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.21□□□□□ -0.45
Ripk1Q60855 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.21□□□□□ -0.45
Ripk1Q60855 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Ripk1Q60855 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ripk1Q60855 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.21□□□□□ -0.45
Ripk1Q60855 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ripk1Q60855 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Ripk1Q60855 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ripk1Q60855 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ripk1Q60855 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ripk1Q60855 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ripk1Q60855 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Gm38671-201ENSMUST00000200573 130 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Gm7287-201ENSMUST00000205267 602 ntBASIC12.2□□□□□ -0.46
Ripk1Q60855 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ripk1Q60855 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ripk1Q60855 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms