Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm12943-201ENSMUST00000119616 210 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm25998-201ENSMUST00000175397 53 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.45□□□□□ -0.42
Col12a1Q60847 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm42511-201ENSMUST00000196160 234 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm9230-201ENSMUST00000188228 532 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.45□□□□□ -0.42
Col12a1Q60847 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.45□□□□□ -0.42
Col12a1Q60847 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm15003-201ENSMUST00000118884 446 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm11836-201ENSMUST00000121022 441 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Mir339-201ENSMUST00000083659 96 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm26989-201ENSMUST00000182608 749 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm8100-201ENSMUST00000182906 988 ntBASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col12a1Q60847 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.44□□□□□ -0.42
Col12a1Q60847 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col12a1Q60847 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.43□□□□□ -0.42
Col12a1Q60847 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col12a1Q60847 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col12a1Q60847 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms