Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm15321-201ENSMUST00000121290 288 ntBASIC13.61□□□□□ -0.23
Foxd4Q60688 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm27838-201ENSMUST00000184829 128 ntBASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.61□□□□□ -0.23
Foxd4Q60688 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Foxd4Q60688 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxd4Q60688 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm14127-201ENSMUST00000117906 678 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
Foxd4Q60688 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm9794-201ENSMUST00000202370 423 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Foxd4Q60688 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm6218-201ENSMUST00000219812 628 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.6□□□□□ -0.23
Foxd4Q60688 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm6562-201ENSMUST00000221903 464 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 AC129017.2-201ENSMUST00000226118 1284 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.6□□□□□ -0.23
Foxd4Q60688 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxd4Q60688 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxd4Q60688 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm14928-201ENSMUST00000120198 477 ntBASIC13.59□□□□□ -0.23
Foxd4Q60688 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm25843-201ENSMUST00000122582 314 ntBASIC13.59□□□□□ -0.23
Foxd4Q60688 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.59□□□□□ -0.23
Foxd4Q60688 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.59□□□□□ -0.23
Foxd4Q60688 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm8902-201ENSMUST00000174341 1096 ntBASIC13.59□□□□□ -0.23
Foxd4Q60688 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm37024-201ENSMUST00000192224 868 ntBASIC13.59□□□□□ -0.23
Foxd4Q60688 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.59□□□□□ -0.23
Foxd4Q60688 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms