Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Mir874-201ENSMUST00000104769 76 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm15427-201ENSMUST00000117288 531 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm9727-201ENSMUST00000161387 555 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm17271-201ENSMUST00000165535 355 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3-3Q5R1C3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3-3Q5R1C3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms