Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44999-201ENSMUST00000207456 1493 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gm11531-201ENSMUST00000117614 555 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gm13492-201ENSMUST00000119772 665 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gm5904-201ENSMUST00000210286 865 ntBASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim41Q5NCC3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm43134-201ENSMUST00000199434 1886 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm6335-201ENSMUST00000118081 1194 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm7816-201ENSMUST00000119884 1194 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm15542-201ENSMUST00000121585 1194 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm2546-201ENSMUST00000182630 991 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 AA914427-201ENSMUST00000193194 1166 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Thoc7-209ENSMUST00000225325 765 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim41Q5NCC3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Gm7789-202ENSMUST00000211273 1400 ntBASIC22.4■■□□□ 1.18
Trim41Q5NCC3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Trim41Q5NCC3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trim41Q5NCC3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim41Q5NCC3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim41Q5NCC3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim41Q5NCC3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Gm7902-201ENSMUST00000198842 947 ntBASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Gm43610-201ENSMUST00000199117 365 ntBASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Gm19221-201ENSMUST00000221827 1477 ntBASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim41Q5NCC3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC22.38■■□□□ 1.17
Trim41Q5NCC3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms