Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Urb1Q571H0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Gm8099-201ENSMUST00000200510 742 ntBASIC11.93□□□□□ -0.5
Urb1Q571H0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.93□□□□□ -0.5
Urb1Q571H0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Urb1Q571H0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm13097-201ENSMUST00000210722 397 ntBASIC11.92□□□□□ -0.5
Urb1Q571H0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.92□□□□□ -0.5
Urb1Q571H0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.92□□□□□ -0.5
Urb1Q571H0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.92□□□□□ -0.5
Urb1Q571H0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Urb1Q571H0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm27046-201ENSMUST00000182160 463 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.91□□□□□ -0.5
Urb1Q571H0 AA914427-201ENSMUST00000193194 1166 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.91□□□□□ -0.5
Urb1Q571H0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm17208-201ENSMUST00000168388 535 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Gm44551-201ENSMUST00000208804 171 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.91□□□□□ -0.5
Urb1Q571H0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Urb1Q571H0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Urb1Q571H0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Urb1Q571H0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms