Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn2bQ56A07 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn2bQ56A07 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn2bQ56A07 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn2bQ56A07 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn2bQ56A07 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.81□□□□□ -0.36
Scn2bQ56A07 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm42550-201ENSMUST00000201553 960 ntBASIC12.81□□□□□ -0.36
Scn2bQ56A07 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn2bQ56A07 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.81□□□□□ -0.36
Scn2bQ56A07 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.81□□□□□ -0.36
Scn2bQ56A07 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn2bQ56A07 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm12490-201ENSMUST00000120255 560 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm11978-201ENSMUST00000122315 466 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Mir7654-201ENSMUST00000185082 70 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.8□□□□□ -0.36
Scn2bQ56A07 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn2bQ56A07 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn2bQ56A07 Gm15371-201ENSMUST00000117057 784 ntBASIC12.79□□□□□ -0.36
Scn2bQ56A07 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms