Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm27533-201ENSMUST00000183800 152 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm27430-201ENSMUST00000184585 107 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm10766-202ENSMUST00000194123 606 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm44333-201ENSMUST00000197168 107 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.15□□□□□ -0.47
Trim40Q3UWA4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim40Q3UWA4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim40Q3UWA4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim40Q3UWA4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Gm17330-201ENSMUST00000221047 165 ntBASIC12.14□□□□□ -0.47
Trim40Q3UWA4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim40Q3UWA4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim40Q3UWA4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms