Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Gm13350-201ENSMUST00000120519 479 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Gm38341-201ENSMUST00000195357 515 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.25□□□□□ -0.61
Q3U1D9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.25□□□□□ -0.61
Q3U1D9 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.25□□□□□ -0.61
Q3U1D9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.25□□□□□ -0.61
Q3U1D9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Q3U1D9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Q3U1D9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.25□□□□□ -0.61
Q3U1D9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Q3U1D9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.25□□□□□ -0.61
Q3U1D9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Q3U1D9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.24□□□□□ -0.61
Q3U1D9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Gm2991-201ENSMUST00000173338 480 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Gm23363-201ENSMUST00000175024 79 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Gm38158-201ENSMUST00000194617 339 ntBASIC11.24□□□□□ -0.61
Q3U1D9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Gm32025-201ENSMUST00000217960 307 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Gm8227-201ENSMUST00000223306 571 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Q3U1D9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Q3U1D9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Q3U1D9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.24□□□□□ -0.61
Q3U1D9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.24□□□□□ -0.61
Q3U1D9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Q3U1D9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Q3U1D9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Q3U1D9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.23□□□□□ -0.61
Q3U1D9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Q3U1D9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms