Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm18905-201ENSMUST00000205454 928 ntBASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm45612-201ENSMUST00000211320 160 ntBASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim6Q3U0I6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm12585-201ENSMUST00000117307 290 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm14140-201ENSMUST00000119999 995 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Mir8117-201ENSMUST00000184773 107 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm44492-201ENSMUST00000197012 141 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm20553-201ENSMUST00000204205 844 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm18195-201ENSMUST00000207604 706 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Gm9229-201ENSMUST00000222777 126 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim6Q3U0I6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smim6Q3U0I6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smim6Q3U0I6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smim6Q3U0I6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smim6Q3U0I6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smim6Q3U0I6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Smim6Q3U0I6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms