Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.98□□□□□ -0.49
MitfQ08874 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Gm27622-201ENSMUST00000183779 60 ntBASIC11.98□□□□□ -0.49
MitfQ08874 Gm27533-201ENSMUST00000183800 152 ntBASIC11.98□□□□□ -0.49
MitfQ08874 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
MitfQ08874 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.98□□□□□ -0.49
MitfQ08874 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.98□□□□□ -0.49
MitfQ08874 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.98□□□□□ -0.49
MitfQ08874 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
MitfQ08874 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.98□□□□□ -0.49
MitfQ08874 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.98□□□□□ -0.49
MitfQ08874 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
MitfQ08874 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MitfQ08874 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.97□□□□□ -0.49
MitfQ08874 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.97□□□□□ -0.49
MitfQ08874 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 Gm10576-201ENSMUST00000191927 825 ntBASIC11.97□□□□□ -0.49
MitfQ08874 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.97□□□□□ -0.49
MitfQ08874 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.97□□□□□ -0.49
MitfQ08874 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MitfQ08874 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
MitfQ08874 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
MitfQ08874 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
MitfQ08874 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MitfQ08874 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
MitfQ08874 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MitfQ08874 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.96□□□□□ -0.49
MitfQ08874 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
MitfQ08874 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.96□□□□□ -0.49
MitfQ08874 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.96□□□□□ -0.49
MitfQ08874 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MitfQ08874 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Daam2-202ENSMUST00000224595 1926 ntBASIC11.96□□□□□ -0.49
MitfQ08874 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.96□□□□□ -0.49
MitfQ08874 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
MitfQ08874 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MitfQ08874 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.96□□□□□ -0.49
MitfQ08874 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
MitfQ08874 Gm12585-201ENSMUST00000117307 290 ntBASIC11.96□□□□□ -0.49
MitfQ08874 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.96□□□□□ -0.49
MitfQ08874 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
MitfQ08874 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms