Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cdx4Q07424 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cdx4Q07424 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.04□□□□□ -0.8
Cdx4Q07424 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.04□□□□□ -0.8
Cdx4Q07424 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cdx4Q07424 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm11814-201ENSMUST00000119515 929 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm44397-201ENSMUST00000195950 113 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.03□□□□□ -0.8
Cdx4Q07424 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.03□□□□□ -0.8
Cdx4Q07424 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cdx4Q07424 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.02□□□□□ -0.8
Cdx4Q07424 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.02□□□□□ -0.8
Cdx4Q07424 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx4Q07424 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.02□□□□□ -0.81
Cdx4Q07424 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Gm7287-201ENSMUST00000205267 602 ntBASIC10.02□□□□□ -0.81
Cdx4Q07424 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx4Q07424 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms