Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Gm13875-201ENSMUST00000120162 282 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Gm13147-202ENSMUST00000177526 1173 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a1Q05722 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 AC116589.9-201ENSMUST00000221462 908 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col9a1Q05722 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.84□□□□□ -0.35
Col9a1Q05722 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a1Q05722 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a1Q05722 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Col9a1Q05722 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.83□□□□□ -0.35
Col9a1Q05722 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col9a1Q05722 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col9a1Q05722 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm23949-201ENSMUST00000104027 127 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm15573-201ENSMUST00000119487 540 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.83□□□□□ -0.36
Col9a1Q05722 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm29516-201ENSMUST00000190402 468 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.83□□□□□ -0.36
Col9a1Q05722 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col9a1Q05722 Gm43811-201ENSMUST00000202862 695 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms