Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.04□□□□□ -0.32
Pfdn6Q03958 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pfdn6Q03958 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.03□□□□□ -0.32
Pfdn6Q03958 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.03□□□□□ -0.32
Pfdn6Q03958 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm28911-201ENSMUST00000188837 117 ntBASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pfdn6Q03958 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.03□□□□□ -0.32
Pfdn6Q03958 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pfdn6Q03958 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pfdn6Q03958 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.02□□□□□ -0.33
Pfdn6Q03958 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.02□□□□□ -0.33
Pfdn6Q03958 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pfdn6Q03958 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Paupar-201ENSMUST00000194826 3482 ntBASIC13.01□□□□□ -0.33
Pfdn6Q03958 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pfdn6Q03958 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms