Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.27□□□□□ -0.45
Nkx3-2P97503 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gm7029-201ENSMUST00000173226 450 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gm6013-201ENSMUST00000212264 699 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gm10146-201ENSMUST00000072739 309 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.26□□□□□ -0.45
Nkx3-2P97503 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx3-2P97503 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx3-2P97503 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.25□□□□□ -0.45
Nkx3-2P97503 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.25□□□□□ -0.45
Nkx3-2P97503 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx3-2P97503 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms