Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lig3P97386 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Gm8213-201ENSMUST00000118191 441 ntBASIC14.18□□□□□ -0.14
Lig3P97386 Gm27682-201ENSMUST00000183930 110 ntBASIC14.18□□□□□ -0.14
Lig3P97386 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.18□□□□□ -0.14
Lig3P97386 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.18□□□□□ -0.14
Lig3P97386 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.18□□□□□ -0.14
Lig3P97386 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lig3P97386 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.18□□□□□ -0.14
Lig3P97386 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lig3P97386 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lig3P97386 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.18□□□□□ -0.14
Lig3P97386 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Gm11793-201ENSMUST00000120433 981 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Gm10156-201ENSMUST00000122364 462 ntBASIC14.17□□□□□ -0.14
Lig3P97386 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Gm6152-201ENSMUST00000151704 340 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lig3P97386 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Lig3P97386 Gm8927-201ENSMUST00000181978 981 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.17□□□□□ -0.14
Lig3P97386 Gm3222-201ENSMUST00000071282 990 ntBASIC14.17□□□□□ -0.14
Lig3P97386 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lig3P97386 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lig3P97386 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lig3P97386 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lig3P97386 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lig3P97386 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.16□□□□□ -0.14
Lig3P97386 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.16□□□□□ -0.14
Lig3P97386 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.16□□□□□ -0.14
Lig3P97386 Gm4271-201ENSMUST00000174444 973 ntBASIC14.16□□□□□ -0.14
Lig3P97386 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.16□□□□□ -0.14
Lig3P97386 Gm43133-201ENSMUST00000197472 463 ntBASIC14.16□□□□□ -0.14
Lig3P97386 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.16□□□□□ -0.14
Lig3P97386 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.16□□□□□ -0.14
Lig3P97386 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lig3P97386 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lig3P97386 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lig3P97386 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lig3P97386 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.15□□□□□ -0.14
Lig3P97386 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms