Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.08□□□□□ -0.16
Trim43cP86449 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43cP86449 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43cP86449 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.08□□□□□ -0.16
Trim43cP86449 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43cP86449 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.07□□□□□ -0.16
Trim43cP86449 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Gm14704-201ENSMUST00000120300 874 ntBASIC14.07□□□□□ -0.16
Trim43cP86449 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim43cP86449 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim43cP86449 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.07□□□□□ -0.16
Trim43cP86449 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim43cP86449 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43cP86449 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43cP86449 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.06□□□□□ -0.16
Trim43cP86449 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim43cP86449 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim43cP86449 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trim43cP86449 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim43cP86449 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim43cP86449 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim43cP86449 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Gm6266-201ENSMUST00000203844 806 ntBASIC14.06□□□□□ -0.16
Trim43cP86449 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.06□□□□□ -0.16
Trim43cP86449 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Mir339-201ENSMUST00000083659 96 ntBASIC14.06□□□□□ -0.16
Trim43cP86449 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.06□□□□□ -0.16
Trim43cP86449 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43cP86449 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43cP86449 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms