Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SgcaP82350 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SgcaP82350 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcaP82350 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.86□□□□□ -0.67
SgcaP82350 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.86□□□□□ -0.67
SgcaP82350 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SgcaP82350 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.86□□□□□ -0.67
SgcaP82350 Gm16476-201ENSMUST00000221544 139 ntBASIC10.86□□□□□ -0.67
SgcaP82350 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.86□□□□□ -0.67
SgcaP82350 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.86□□□□□ -0.67
SgcaP82350 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcaP82350 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SgcaP82350 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
SgcaP82350 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SgcaP82350 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SgcaP82350 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SgcaP82350 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Gm24420-201ENSMUST00000176676 59 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcaP82350 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcaP82350 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.85□□□□□ -0.67
SgcaP82350 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SgcaP82350 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.85□□□□□ -0.67
SgcaP82350 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.85□□□□□ -0.67
SgcaP82350 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcaP82350 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcaP82350 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
SgcaP82350 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SgcaP82350 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcaP82350 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcaP82350 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.84□□□□□ -0.67
SgcaP82350 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms