Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.37□□□□□ -0.27
Smad1P70340 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smad1P70340 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.37□□□□□ -0.27
Smad1P70340 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smad1P70340 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smad1P70340 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smad1P70340 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smad1P70340 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smad1P70340 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.36□□□□□ -0.27
Smad1P70340 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Smad1P70340 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Smad1P70340 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.36□□□□□ -0.27
Smad1P70340 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.36□□□□□ -0.27
Smad1P70340 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.36□□□□□ -0.27
Smad1P70340 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Gm27847-201ENSMUST00000183711 107 ntBASIC13.36□□□□□ -0.27
Smad1P70340 Gm27375-201ENSMUST00000183799 107 ntBASIC13.36□□□□□ -0.27
Smad1P70340 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.36□□□□□ -0.27
Smad1P70340 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.36□□□□□ -0.27
Smad1P70340 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smad1P70340 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smad1P70340 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Smad1P70340 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.35□□□□□ -0.27
Smad1P70340 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Smad1P70340 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Gm26464-201ENSMUST00000157094 305 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Gm8652-201ENSMUST00000181363 964 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.35□□□□□ -0.27
Smad1P70340 Gm43179-201ENSMUST00000198797 275 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.35□□□□□ -0.27
Smad1P70340 Gm19078-201ENSMUST00000206311 727 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 Gm17330-201ENSMUST00000221047 165 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smad1P70340 Olfr582-201ENSMUST00000098212 960 ntBASIC13.35□□□□□ -0.27
Smad1P70340 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smad1P70340 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.35□□□□□ -0.27
Smad1P70340 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smad1P70340 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smad1P70340 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smad1P70340 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smad1P70340 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms