Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.25□□□□□ -0.29
Ybx1P62960 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ybx1P62960 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.25□□□□□ -0.29
Ybx1P62960 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Gm2260-201ENSMUST00000184965 657 ntBASIC13.25□□□□□ -0.29
Ybx1P62960 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.25□□□□□ -0.29
Ybx1P62960 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.25□□□□□ -0.29
Ybx1P62960 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ybx1P62960 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ybx1P62960 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.24□□□□□ -0.29
Ybx1P62960 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ybx1P62960 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Ybx1P62960 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm12176-201ENSMUST00000121420 875 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 Gm14017-201ENSMUST00000121934 386 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.24□□□□□ -0.29
Ybx1P62960 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm27341-201ENSMUST00000183570 106 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.24□□□□□ -0.29
Ybx1P62960 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Ybx1P62960 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ybx1P62960 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ybx1P62960 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ybx1P62960 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.23□□□□□ -0.29
Ybx1P62960 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.23□□□□□ -0.29
Ybx1P62960 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ybx1P62960 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ybx1P62960 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ybx1P62960 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ybx1P62960 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.23□□□□□ -0.29
Ybx1P62960 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.23□□□□□ -0.29
Ybx1P62960 Gm13570-201ENSMUST00000140763 309 ntBASIC13.23□□□□□ -0.29
Ybx1P62960 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Ybx1P62960 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.23□□□□□ -0.29
Ybx1P62960 Gm38317-201ENSMUST00000195564 343 ntBASIC13.23□□□□□ -0.29
Ybx1P62960 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.23□□□□□ -0.29
Ybx1P62960 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.23□□□□□ -0.29
Ybx1P62960 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms