Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vbp1P61759 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vbp1P61759 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Vbp1P61759 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Vbp1P61759 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.72□□□□□ -0.53
Vbp1P61759 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Gm13385-201ENSMUST00000121089 220 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.72□□□□□ -0.53
Vbp1P61759 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Gm20553-201ENSMUST00000204205 844 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.72□□□□□ -0.53
Vbp1P61759 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.72□□□□□ -0.53
Vbp1P61759 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vbp1P61759 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vbp1P61759 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Vbp1P61759 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vbp1P61759 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vbp1P61759 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Vbp1P61759 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.71□□□□□ -0.53
Vbp1P61759 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.71□□□□□ -0.53
Vbp1P61759 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm28033-201ENSMUST00000184224 96 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm38225-201ENSMUST00000194001 393 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.71□□□□□ -0.53
Vbp1P61759 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.71□□□□□ -0.53
Vbp1P61759 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Vbp1P61759 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vbp1P61759 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Vbp1P61759 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.71□□□□□ -0.54
Vbp1P61759 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Vbp1P61759 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vbp1P61759 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vbp1P61759 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms