Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sec61a1P61620 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61a1P61620 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.44□□□□□ -0.58
Sec61a1P61620 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Gm5354-201ENSMUST00000182417 973 ntBASIC11.43□□□□□ -0.58
Sec61a1P61620 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.43□□□□□ -0.58
Sec61a1P61620 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.43□□□□□ -0.58
Sec61a1P61620 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.43□□□□□ -0.58
Sec61a1P61620 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61a1P61620 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61a1P61620 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.43□□□□□ -0.58
Sec61a1P61620 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gm12341-201ENSMUST00000119724 503 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gm18905-201ENSMUST00000205454 928 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.42□□□□□ -0.58
Sec61a1P61620 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.42□□□□□ -0.58
Sec61a1P61620 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sec61a1P61620 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61a1P61620 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms