Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm12151-201ENSMUST00000121374 290 ntBASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.51□□□□□ -0.57
Sf3b6P59708 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm38144-201ENSMUST00000192790 465 ntBASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.51□□□□□ -0.57
Sf3b6P59708 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.51□□□□□ -0.57
Sf3b6P59708 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3b6P59708 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3b6P59708 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.5□□□□□ -0.57
Sf3b6P59708 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.5□□□□□ -0.57
Sf3b6P59708 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.5□□□□□ -0.57
Sf3b6P59708 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sf3b6P59708 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.5□□□□□ -0.57
Sf3b6P59708 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.5□□□□□ -0.57
Sf3b6P59708 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sf3b6P59708 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm6754-201ENSMUST00000117124 913 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm27838-201ENSMUST00000184829 128 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Mir6977-201ENSMUST00000184960 64 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm7775-201ENSMUST00000218871 853 ntBASIC11.49□□□□□ -0.57
Sf3b6P59708 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms