Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.37■□□□□ 0.37
Nphp4P59240 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nphp4P59240 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Nphp4P59240 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm23200-201ENSMUST00000104379 132 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 Gm12217-201ENSMUST00000118858 696 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm5070-201ENSMUST00000177599 862 ntBASIC17.36■□□□□ 0.37
Nphp4P59240 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nphp4P59240 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nphp4P59240 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.36■□□□□ 0.37
Nphp4P59240 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nphp4P59240 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nphp4P59240 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC17.35■□□□□ 0.37
Nphp4P59240 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nphp4P59240 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Gm9083-201ENSMUST00000120423 819 ntBASIC17.35■□□□□ 0.37
Nphp4P59240 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.35■□□□□ 0.37
Nphp4P59240 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.35■□□□□ 0.37
Nphp4P59240 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nphp4P59240 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.35■□□□□ 0.37
Nphp4P59240 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Nphp4P59240 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.35■□□□□ 0.37
Nphp4P59240 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.35■□□□□ 0.37
Nphp4P59240 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.35■□□□□ 0.37
Nphp4P59240 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Nphp4P59240 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nphp4P59240 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.34■□□□□ 0.37
Nphp4P59240 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nphp4P59240 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nphp4P59240 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC17.34■□□□□ 0.37
Nphp4P59240 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Gm24749-201ENSMUST00000157838 343 ntBASIC17.34■□□□□ 0.37
Nphp4P59240 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17.34■□□□□ 0.37
Nphp4P59240 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Nphp4P59240 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nphp4P59240 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nphp4P59240 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nphp4P59240 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nphp4P59240 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC17.33■□□□□ 0.36
Nphp4P59240 Gm9022-201ENSMUST00000182482 992 ntBASIC17.33■□□□□ 0.36
Nphp4P59240 Gm7003-201ENSMUST00000195089 312 ntBASIC17.33■□□□□ 0.36
Nphp4P59240 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms