Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tpm2P58774 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.9□□□□□ -0.02
Tpm2P58774 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Tpm2P58774 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm2P58774 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Gm6912-201ENSMUST00000117218 544 ntBASIC14.89□□□□□ -0.03
Tpm2P58774 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tpm2P58774 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.89□□□□□ -0.03
Tpm2P58774 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.89□□□□□ -0.03
Tpm2P58774 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.89□□□□□ -0.03
Tpm2P58774 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Tpm2P58774 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm2P58774 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.88□□□□□ -0.03
Tpm2P58774 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.88□□□□□ -0.03
Tpm2P58774 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.88□□□□□ -0.03
Tpm2P58774 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Tpm2P58774 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.88□□□□□ -0.03
Tpm2P58774 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.88□□□□□ -0.03
Tpm2P58774 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tpm2P58774 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.88□□□□□ -0.03
Tpm2P58774 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm2P58774 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm2P58774 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tpm2P58774 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm2P58774 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm2P58774 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm2P58774 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm2P58774 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms