Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm44069-201ENSMUST00000204898 506 ntBASIC12.39□□□□□ -0.43
Cdkn2bP55271 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm6983-201ENSMUST00000214912 628 ntBASIC12.39□□□□□ -0.43
Cdkn2bP55271 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.39□□□□□ -0.43
Cdkn2bP55271 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdkn2bP55271 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.39□□□□□ -0.43
Cdkn2bP55271 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gm16202-201ENSMUST00000117532 544 ntBASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gm44397-201ENSMUST00000195950 113 ntBASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.38□□□□□ -0.43
Cdkn2bP55271 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.38□□□□□ -0.43
Cdkn2bP55271 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdkn2bP55271 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.37□□□□□ -0.43
Cdkn2bP55271 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.37□□□□□ -0.43
Cdkn2bP55271 Itm2b-204ENSMUST00000228637 783 ntBASIC12.37□□□□□ -0.43
Cdkn2bP55271 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.37□□□□□ -0.43
Cdkn2bP55271 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdkn2bP55271 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms