Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox1P53783 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gm13736-201ENSMUST00000119272 253 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Gm14832-201ENSMUST00000121289 322 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Gm22877-201ENSMUST00000175451 105 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox1P53783 Gm45856-201ENSMUST00000212752 416 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox1P53783 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Gm7851-201ENSMUST00000117574 323 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Gm14704-201ENSMUST00000120300 874 ntBASIC13.17□□□□□ -0.3
Sox1P53783 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox1P53783 Gm25604-201ENSMUST00000158359 133 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox1P53783 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox1P53783 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Gm2445-201ENSMUST00000182798 989 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Gm6722-201ENSMUST00000221586 390 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox1P53783 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.17□□□□□ -0.3
Sox1P53783 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
Sox1P53783 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox1P53783 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox1P53783 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox1P53783 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.16□□□□□ -0.3
Sox1P53783 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox1P53783 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox1P53783 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Sox1P53783 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms