Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lbx1P52955 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lbx1P52955 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Lbx1P52955 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lbx1P52955 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lbx1P52955 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.52□□□□□ -0.4
Lbx1P52955 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lbx1P52955 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lbx1P52955 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.52□□□□□ -0.41
Lbx1P52955 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.52□□□□□ -0.41
Lbx1P52955 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lbx1P52955 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.52□□□□□ -0.41
Lbx1P52955 Gm12058-201ENSMUST00000118614 437 ntBASIC12.52□□□□□ -0.41
Lbx1P52955 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.52□□□□□ -0.41
Lbx1P52955 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.52□□□□□ -0.41
Lbx1P52955 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Gm14005-208ENSMUST00000223654 681 ntBASIC12.52□□□□□ -0.41
Lbx1P52955 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.52□□□□□ -0.41
Lbx1P52955 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.52□□□□□ -0.41
Lbx1P52955 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lbx1P52955 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lbx1P52955 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.52□□□□□ -0.41
Lbx1P52955 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lbx1P52955 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lbx1P52955 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Lbx1P52955 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lbx1P52955 Gm12218-201ENSMUST00000117666 399 ntBASIC12.51□□□□□ -0.41
Lbx1P52955 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.51□□□□□ -0.41
Lbx1P52955 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.51□□□□□ -0.41
Lbx1P52955 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lbx1P52955 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lbx1P52955 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Lbx1P52955 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Lbx1P52955 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms