Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.81□□□□□ -0.36
Pdx1P52946 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdx1P52946 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.81□□□□□ -0.36
Pdx1P52946 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pdx1P52946 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.8□□□□□ -0.36
Pdx1P52946 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.8□□□□□ -0.36
Pdx1P52946 Gm13829-201ENSMUST00000119600 138 ntBASIC12.8□□□□□ -0.36
Pdx1P52946 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Gm26185-201ENSMUST00000157692 266 ntBASIC12.8□□□□□ -0.36
Pdx1P52946 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.8□□□□□ -0.36
Pdx1P52946 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Gm27682-201ENSMUST00000183930 110 ntBASIC12.8□□□□□ -0.36
Pdx1P52946 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.8□□□□□ -0.36
Pdx1P52946 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.8□□□□□ -0.36
Pdx1P52946 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.8□□□□□ -0.36
Pdx1P52946 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.8□□□□□ -0.36
Pdx1P52946 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdx1P52946 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdx1P52946 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.79□□□□□ -0.36
Pdx1P52946 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Pdx1P52946 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Gm11637-201ENSMUST00000120601 592 ntBASIC12.79□□□□□ -0.36
Pdx1P52946 Gm12363-201ENSMUST00000122250 668 ntBASIC12.79□□□□□ -0.36
Pdx1P52946 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.79□□□□□ -0.36
Pdx1P52946 Gm40466-201ENSMUST00000212174 422 ntBASIC12.79□□□□□ -0.36
Pdx1P52946 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.79□□□□□ -0.36
Pdx1P52946 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.79□□□□□ -0.36
Pdx1P52946 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.79□□□□□ -0.36
Pdx1P52946 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdx1P52946 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdx1P52946 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms