Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Shmt1P50431 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Gm3890-201ENSMUST00000182416 207 ntBASIC13.69□□□□□ -0.22
Shmt1P50431 Gm43133-201ENSMUST00000197472 463 ntBASIC13.69□□□□□ -0.22
Shmt1P50431 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.69□□□□□ -0.22
Shmt1P50431 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.69□□□□□ -0.22
Shmt1P50431 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shmt1P50431 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.69□□□□□ -0.22
Shmt1P50431 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Shmt1P50431 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shmt1P50431 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.68□□□□□ -0.22
Shmt1P50431 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Gm38158-201ENSMUST00000194617 339 ntBASIC13.68□□□□□ -0.22
Shmt1P50431 Gm43118-201ENSMUST00000199149 775 ntBASIC13.68□□□□□ -0.22
Shmt1P50431 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.68□□□□□ -0.22
Shmt1P50431 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Shmt1P50431 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Shmt1P50431 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.68□□□□□ -0.22
Shmt1P50431 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.68□□□□□ -0.22
Shmt1P50431 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt1P50431 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shmt1P50431 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.67□□□□□ -0.22
Shmt1P50431 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Gm16379-201ENSMUST00000161469 348 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Gm8762-201ENSMUST00000193486 339 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.67□□□□□ -0.22
Shmt1P50431 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.67□□□□□ -0.22
Shmt1P50431 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Shmt1P50431 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt1P50431 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms